J3_4U1V_070
3D structure
- PDB id
- 4U1V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to linopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UG*UGUUG*CGCAA
- Length
- 12 nucleotides
- Bulged bases
- 4U1V|1|CA|U|1086
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4U1V_070 not in the Motif Atlas
- Homologous match to J3_5J7L_009
- Geometric discrepancy: 0.1019
- The information below is about J3_5J7L_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76043.3
- Basepair signature
- cWW-cWW-tSS-F-F-F-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
4U1V|1|CA|U|1073
4U1V|1|CA|G|1074
*
4U1V|1|CA|U|1083
4U1V|1|CA|G|1084
4U1V|1|CA|U|1085
4U1V|1|CA|U|1086
4U1V|1|CA|G|1087
*
4U1V|1|CA|C|1098
4U1V|1|CA|G|1099
4U1V|1|CA|C|1100
4U1V|1|CA|A|1101
4U1V|1|CA|A|1102
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CB
- 30S ribosomal protein S2
- Chain CE
- 30S ribosomal protein S5
Coloring options: