3D structure

PDB id
4U3M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of Anisomycin bound to the yeast 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CUA*UUACG*CAAAG
Length
13 nucleotides
Bulged bases
4U3M|1|6|A|1093
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4U3M_051 not in the Motif Atlas
Homologous match to J3_4V88_034
Geometric discrepancy: 0.0707
The information below is about J3_4V88_034
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_23622.1
Basepair signature
cWW-tWW-tWW-F-cWW-F-cWW
Number of instances in this motif group
2

Unit IDs

4U3M|1|6|C|1037
4U3M|1|6|U|1038
4U3M|1|6|A|1039
*
4U3M|1|6|U|1079
4U3M|1|6|U|1080
4U3M|1|6|A|1081
4U3M|1|6|C|1082
4U3M|1|6|G|1083
*
4U3M|1|6|C|1090
4U3M|1|6|A|1091
4U3M|1|6|A|1092
4U3M|1|6|A|1093
4U3M|1|6|G|1094

Current chains

Chain 6
18S rRNA

Nearby chains

Chain d1
40S ribosomal protein S21-A
Chain d2
40S ribosomal protein S22-A
Chain d6
40S ribosomal protein S26-B
Chain d7
40S ribosomal protein S27-A
Chain s0
40S ribosomal protein S0-A

Coloring options:


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