J3_4UG0_015

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AG*CGCAAAUUA*UAGU

Length

15 nucleotides

Bulged bases

4UG0|1|S2|U|488

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|S2|A|40
4UG0|1|S2|G|41
*
4UG0|1|S2|C|481
4UG0|1|S2|G|482
4UG0|1|S2|C|483
4UG0|1|S2|A|484
4UG0|1|S2|A|485
4UG0|1|S2|A|486
4UG0|1|S2|U|487
4UG0|1|S2|U|488
4UG0|1|S2|A|489
*
4UG0|1|S2|U|511
4UG0|1|S2|A|512
4UG0|1|S2|G|513
4UG0|1|S2|U|514

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

40S RIBOSOMAL PROTEIN S4, X ISOFORM

Chain SJ

40S RIBOSOMAL PROTEIN S9

Chain SX

40S RIBOSOMAL PROTEIN S23

Chain SY

40S RIBOSOMAL PROTEIN S24