J3_4UG0_025

3D structure

PDB id

4UG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE HUMAN 80S RIBOSOME

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GCGCAGUCCGC*GCGGUGCG*CGACGUC

Length

26 nucleotides

Bulged bases

4UG0|1|L5|C|451, 4UG0|1|L5|G|1296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UG0|1|L5|G|448
4UG0|1|L5|C|449
4UG0|1|L5|G|450
4UG0|1|L5|C|451
4UG0|1|L5|A|452
4UG0|1|L5|G|453
4UG0|1|L5|U|454
4UG0|1|L5|C|455
4UG0|1|L5|C|456
4UG0|1|L5|G|457
4UG0|1|L5|C|458
*
4UG0|1|L5|G|698
4UG0|1|L5|C|699
4UG0|1|L5|G|700
4UG0|1|L5|G|701
4UG0|1|L5|U|702
4UG0|1|L5|G|703
4UG0|1|L5|C|704
4UG0|1|L5|G|705
*
4UG0|1|L5|C|1292
4UG0|1|L5|G|1293
4UG0|1|L5|A|1294
4UG0|1|L5|C|1295
4UG0|1|L5|G|1296
4UG0|1|L5|U|1297
4UG0|1|L5|C|1298

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LE

60S RIBOSOMAL PROTEIN L6

Chain Le

60S RIBOSOMAL PROTEIN L32

Chain Lf

60S RIBOSOMAL PROTEIN L35A

Chain Lr

60S RIBOSOMAL PROTEIN L28