J3_4UG0_026
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- ACC*GAGGGAGCGAGACCCGUCGCCGCG*CGCACGGGGU
- Length
- 37 nucleotides
- Bulged bases
- 4UG0|1|L5|G|961, 4UG0|1|L5|A|964, 4UG0|1|L5|G|965, 4UG0|1|L5|A|966, 4UG0|1|L5|G|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|L5|A|711
4UG0|1|L5|C|712
4UG0|1|L5|C|713
*
4UG0|1|L5|G|955
4UG0|1|L5|A|956
4UG0|1|L5|G|957
4UG0|1|L5|G|958
4UG0|1|L5|G|959
4UG0|1|L5|A|960
4UG0|1|L5|G|961
4UG0|1|L5|C|962
4UG0|1|L5|G|963
4UG0|1|L5|A|964
4UG0|1|L5|G|965
4UG0|1|L5|A|966
4UG0|1|L5|C|967
4UG0|1|L5|C|968
4UG0|1|L5|C|969
4UG0|1|L5|G|970
4UG0|1|L5|U|971
4UG0|1|L5|C|972
4UG0|1|L5|G|973
4UG0|1|L5|C|974
4UG0|1|L5|C|975
4UG0|1|L5|G|976
4UG0|1|L5|C|977
4UG0|1|L5|G|978
*
4UG0|1|L5|C|1276
4UG0|1|L5|G|1277
4UG0|1|L5|C|1278
4UG0|1|L5|A|1279
4UG0|1|L5|C|1280
4UG0|1|L5|G|1281
4UG0|1|L5|G|1282
4UG0|1|L5|G|1283
4UG0|1|L5|G|1284
4UG0|1|L5|U|1285
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LC
- 60S RIBOSOMAL PROTEIN L4
- Chain LE
- 60S RIBOSOMAL PROTEIN L6
- Chain LF
- 60S RIBOSOMAL PROTEIN L7
- Chain Le
- 60S RIBOSOMAL PROTEIN L32
- Chain Lf
- 60S RIBOSOMAL PROTEIN L35A
- Chain Lr
- 60S RIBOSOMAL PROTEIN L28
Coloring options: