J3_4UG0_035
3D structure
- PDB id
- 4UG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF THE HUMAN 80S RIBOSOME
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- ACCAG*CCAGUAA*UGAUUAAGU
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UG0|1|S2|A|1217
4UG0|1|S2|C|1218
4UG0|1|S2|C|1219
4UG0|1|S2|A|1220
4UG0|1|S2|G|1221
*
4UG0|1|S2|C|1645
4UG0|1|S2|C|1646
4UG0|1|S2|A|1647
4UG0|1|S2|G|1648
4UG0|1|S2|U|1649
4UG0|1|S2|A|1650
4UG0|1|S2|A|1651
*
4UG0|1|S2|U|1673
4UG0|1|S2|G|1674
4UG0|1|S2|A|1675
4UG0|1|S2|U|1676
4UG0|1|S2|U|1677
4UG0|1|S2|A|1678
4UG0|1|S2|A|1679
4UG0|1|S2|G|1680
4UG0|1|S2|U|1681
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain S6
- Transfer RNA; tRNA
- Chain SF
- 40S RIBOSOMAL PROTEIN S5
- Chain SQ
- 40S RIBOSOMAL PROTEIN S16
- Chain Sc
- 40S RIBOSOMAL PROTEIN S28
Coloring options: