J3_4UJE_010

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

UG*CGACC*GA

Length

9 nucleotides

Bulged bases

4UJE|1|A2|G|2563, 4UJE|1|A2|C|2565

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|U|2552
4UJE|1|A2|G|2553
*
4UJE|1|A2|C|2562
4UJE|1|A2|G|2563
4UJE|1|A2|A|2564
4UJE|1|A2|C|2565
4UJE|1|A2|C|2566
*
4UJE|1|A2|G|2733
4UJE|1|A2|A|2734

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CZ

60S RIBOSOMAL PROTEIN L27

Chain Cg

60S RIBOSOMAL PROTEIN L34

Chain Ck

60S RIBOSOMAL PROTEIN L38