J3_4UJE_023

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CUUAAUUUG*CGGGAAACCUCAC*GGCUG

Length

27 nucleotides

Bulged bases

4UJE|1|B1|A|1260

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|B1|C|1237
4UJE|1|B1|U|1238
4UJE|1|B1|U|1239
4UJE|1|B1|A|1240
4UJE|1|B1|A|1241
4UJE|1|B1|U|1242
4UJE|1|B1|U|1243
4UJE|1|B1|U|1244
4UJE|1|B1|G|1245
*
4UJE|1|B1|C|1254
4UJE|1|B1|G|1255
4UJE|1|B1|G|1256
4UJE|1|B1|G|1257
4UJE|1|B1|A|1258
4UJE|1|B1|A|1259
4UJE|1|B1|A|1260
4UJE|1|B1|C|1261
4UJE|1|B1|C|1262
4UJE|1|B1|U|1263
4UJE|1|B1|C|1264
4UJE|1|B1|A|1265
4UJE|1|B1|C|1266
*
4UJE|1|B1|G|1516
4UJE|1|B1|G|1517
4UJE|1|B1|C|1518
4UJE|1|B1|U|1519
4UJE|1|B1|G|1520

Current chains

Chain B1

18S Ribosomal RNA

Nearby chains

Chain BP

40S RIBOSOMAL PROTEIN S15

Chain BQ

40S RIBOSOMAL PROTEIN S16

Chain BS

40S RIBOSOMAL PROTEIN S18

Chain BU

40S RIBOSOMAL PROTEIN S20

Chain Bd

40S RIBOSOMAL PROTEIN S29