J3_4UJE_026

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

UG*UGUCUG*CGAUAA

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|B1|U|1350
4UJE|1|B1|G|1351
*
4UJE|1|B1|U|1360
4UJE|1|B1|G|1361
4UJE|1|B1|U|1362
4UJE|1|B1|C|1363
4UJE|1|B1|U|1364
4UJE|1|B1|G|1365
*
4UJE|1|B1|C|1374
4UJE|1|B1|G|1375
4UJE|1|B1|A|1376
4UJE|1|B1|U|1377
4UJE|1|B1|A|1378
4UJE|1|B1|A|1379

Current chains

Chain B1

18S Ribosomal RNA

Nearby chains

Chain BA

40S RIBOSOMAL PROTEIN SA

Chain BC

40S RIBOSOMAL PROTEIN S2

Chain BR

40S RIBOSOMAL PROTEIN S17

Chain Ba

40S RIBOSOMAL PROTEIN S26