J3_4UJE_041
3D structure
- PDB id
- 4UJE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.9 Å
Loop
- Sequence
- GUGAGGCGGGGGGGCG*CUCGCUUCUGGCGCCAAG*CGACCCGCUC
- Length
- 44 nucleotides
- Bulged bases
- 4UJE|1|A2|G|4052, 4UJE|1|A2|G|4054, 4UJE|1|A2|G|4055, 4UJE|1|A2|G|4063, 4UJE|1|A2|G|4082, 4UJE|1|A2|C|4083, 4UJE|1|A2|U|4084, 4UJE|1|A2|U|4085, 4UJE|1|A2|C|4086, 4UJE|1|A2|U|4087, 4UJE|1|A2|G|4088, 4UJE|1|A2|C|4092, 4UJE|1|A2|C|4093, 4UJE|1|A2|C|4122, 4UJE|1|A2|U|4123
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4UJE|1|A2|G|4050
4UJE|1|A2|U|4051
4UJE|1|A2|G|4052
4UJE|1|A2|A|4053
4UJE|1|A2|G|4054
4UJE|1|A2|G|4055
4UJE|1|A2|C|4056
4UJE|1|A2|G|4057
4UJE|1|A2|G|4058
4UJE|1|A2|G|4059
4UJE|1|A2|G|4060
4UJE|1|A2|G|4061
4UJE|1|A2|G|4062
4UJE|1|A2|G|4063
4UJE|1|A2|C|4064
4UJE|1|A2|G|4065
*
4UJE|1|A2|C|4079
4UJE|1|A2|U|4080
4UJE|1|A2|C|4081
4UJE|1|A2|G|4082
4UJE|1|A2|C|4083
4UJE|1|A2|U|4084
4UJE|1|A2|U|4085
4UJE|1|A2|C|4086
4UJE|1|A2|U|4087
4UJE|1|A2|G|4088
4UJE|1|A2|G|4089
4UJE|1|A2|C|4090
4UJE|1|A2|G|4091
4UJE|1|A2|C|4092
4UJE|1|A2|C|4093
4UJE|1|A2|A|4094
4UJE|1|A2|A|4095
4UJE|1|A2|G|4096
*
4UJE|1|A2|C|4115
4UJE|1|A2|G|4116
4UJE|1|A2|A|4117
4UJE|1|A2|C|4118
4UJE|1|A2|C|4119
4UJE|1|A2|C|4120
4UJE|1|A2|G|4121
4UJE|1|A2|C|4122
4UJE|1|A2|U|4123
4UJE|1|A2|C|4124
Current chains
- Chain A2
- 28S Ribosomal RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain CA
- 60S RIBOSOMAL PROTEIN L8
- Chain CG
- 60S RIBOSOMAL PROTEIN L7A
- Chain CX
- 60S RIBOSOMAL PROTEIN L23A
- Chain CZ
- 60S RIBOSOMAL PROTEIN L27
- Chain Cc
- 60S RIBOSOMAL PROTEIN L30
- Chain Cg
- 60S RIBOSOMAL PROTEIN L34
- Chain Cp
- 60S RIBOSOMAL PROTEIN L37A
Coloring options: