J3_4UJE_044

3D structure

PDB id

4UJE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement

Experimental method

ELECTRON MICROSCOPY

Resolution

6.9 Å

Loop

Sequence

CAUUCG*CCUGCUUCUG*CAAG

Length

20 nucleotides

Bulged bases

4UJE|1|A2|U|4946

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4UJE|1|A2|C|4925
4UJE|1|A2|A|4926
4UJE|1|A2|U|4927
4UJE|1|A2|U|4928
4UJE|1|A2|C|4929
4UJE|1|A2|G|4930
*
4UJE|1|A2|C|4938
4UJE|1|A2|C|4939
4UJE|1|A2|U|4940
4UJE|1|A2|G|4941
4UJE|1|A2|C|4942
4UJE|1|A2|U|4943
4UJE|1|A2|U|4944
4UJE|1|A2|C|4945
4UJE|1|A2|U|4946
4UJE|1|A2|G|4947
*
4UJE|1|A2|C|5014
4UJE|1|A2|A|5015
4UJE|1|A2|A|5016
4UJE|1|A2|G|5017

Current chains

Chain A2

28S Ribosomal RNA

Nearby chains

Chain CB

60S RIBOSOMAL PROTEIN L3

Chain CP

60S RIBOSOMAL PROTEIN L17

Chain Cd

60S RIBOSOMAL PROTEIN L31