3D structure

PDB id
4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGAU*AUUUAAAG*CAC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4UY8|1|A|G|1055
4UY8|1|A|G|1056
4UY8|1|A|A|1057
4UY8|1|A|U|1058
*
4UY8|1|A|A|1080
4UY8|1|A|U|1081
4UY8|1|A|U|1082
4UY8|1|A|U|1083
4UY8|1|A|A|1084
4UY8|1|A|A|1085
4UY8|1|A|A|1086
4UY8|1|A|G|1087
*
4UY8|1|A|C|1102
4UY8|1|A|A|1103
4UY8|1|A|C|1104

Current chains

Chain A
RRNA-23S RIBOSOMAL RNA

Nearby chains

Chain 4
50S RIBOSOMAL PROTEIN L36
Chain 5
50S RIBOSOMAL PROTEIN L10
Chain I
50S RIBOSOMAL PROTEIN L11

Coloring options:

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