J3_4UY8_007
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUAAU*AGGUUAG*CAUAAG
- Length
- 18 nucleotides
- Bulged bases
- 4UY8|1|A|U|2334
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4UY8_007 not in the Motif Atlas
- Homologous match to J3_5J7L_071
- Geometric discrepancy: 0.0655
- The information below is about J3_5J7L_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44961.1
- Basepair signature
- cWW-tSH-F-cWW-F-tHW-cWW-tWW-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
4UY8|1|A|C|2295
4UY8|1|A|U|2296
4UY8|1|A|A|2297
4UY8|1|A|A|2298
4UY8|1|A|U|2299
*
4UY8|1|A|A|2317
4UY8|1|A|G|2318
4UY8|1|A|G|2319
4UY8|1|A|U|2320
4UY8|1|A|U|2321
4UY8|1|A|A|2322
4UY8|1|A|G|2323
*
4UY8|1|A|C|2332
4UY8|1|A|A|2333
4UY8|1|A|U|2334
4UY8|1|A|A|2335
4UY8|1|A|A|2336
4UY8|1|A|G|2337
Current chains
- Chain A
- RRNA-23S RIBOSOMAL RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S RIBOSOMAL PROTEIN L5
- Chain O
- 50S RIBOSOMAL PROTEIN L18
- Chain V
- Transfer RNA; tRNA
- Chain W
- 50S RIBOSOMAL PROTEIN L27
Coloring options: