J3_4UY8_010
3D structure
- PDB id
- 4UY8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular basis for the ribosome functioning as a L-tryptophan sensor - Cryo-EM structure of a TnaC stalled E.coli ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GCCGUAG*CGC*GGAAC
- Length
- 15 nucleotides
- Bulged bases
- 4UY8|1|B|U|14, 4UY8|1|B|A|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4UY8_010 not in the Motif Atlas
- Homologous match to J3_5J7L_049
- Geometric discrepancy: 0.139
- The information below is about J3_5J7L_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_89095.1
- Basepair signature
- cWW-F-F-F-tHS-F-cWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
4UY8|1|B|G|10
4UY8|1|B|C|11
4UY8|1|B|C|12
4UY8|1|B|G|13
4UY8|1|B|U|14
4UY8|1|B|A|15
4UY8|1|B|G|16
*
4UY8|1|B|C|68
4UY8|1|B|G|69
4UY8|1|B|C|70
*
4UY8|1|B|G|106
4UY8|1|B|G|107
4UY8|1|B|A|108
4UY8|1|B|A|109
4UY8|1|B|C|110
Current chains
- Chain B
- RRNA-5S RIBOSOMAL RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain O
- 50S RIBOSOMAL PROTEIN L18
- Chain W
- 50S RIBOSOMAL PROTEIN L27
Coloring options: