J3_4V19_007

3D structure

PDB id

4V19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the large subunit of the mammalian mitoribosome, part 1 of 2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUAG*CUAUAGAGAUAGUAC*GGAAAG

Length

25 nucleotides

Bulged bases

4V19|1|A|U|109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V19|1|A|C|8
4V19|1|A|U|9
4V19|1|A|A|10
4V19|1|A|G|11
*
4V19|1|A|C|106
4V19|1|A|U|107
4V19|1|A|A|108
4V19|1|A|U|109
4V19|1|A|A|110
4V19|1|A|G|111
4V19|1|A|A|112
4V19|1|A|G|113
4V19|1|A|A|114
4V19|1|A|U|115
4V19|1|A|A|116
4V19|1|A|G|117
4V19|1|A|U|118
4V19|1|A|A|119
4V19|1|A|C|120
*
4V19|1|A|G|127
4V19|1|A|G|127|||A
4V19|1|A|A|128
4V19|1|A|A|129
4V19|1|A|A|130
4V19|1|A|G|131

Current chains

Chain A

MITORIBOSOMAL 16S RRNA

Nearby chains

Chain 2

MITORIBOSOMAL PROTEIN UL29M, MRPL47

Chain 7

MITORIBOSOMAL PROTEIN BL34M, MRPL34

Chain F

MITORIBOSOMAL PROTEIN UL4M, MRPL4

Chain U

MITORIBOSOMAL PROTEIN BL20M, MRPL20

Chain X

MITORIBOSOMAL PROTEIN UL23M, MRPL23

Chain Y

MITORIBOSOMAL PROTEIN UL24M, MRPL24