J3_4V49_015

3D structure

PDB id

4V49 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a Streptomycin Dependent Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

8.7 Å

Loop

Sequence

UGAGCUA*UAGGA*UAACCGAA

Length

20 nucleotides

Bulged bases

4V49|1|B0|G|699, 4V49|1|B0|G|789, 4V49|1|B0|A|802, 4V49|1|B0|C|803, 4V49|1|B0|G|805

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V49|1|B0|U|696
4V49|1|B0|G|697
4V49|1|B0|A|698
4V49|1|B0|G|699
4V49|1|B0|C|700
4V49|1|B0|U|701
4V49|1|B0|A|702
*
4V49|1|B0|U|786
4V49|1|B0|A|787
4V49|1|B0|G|788
4V49|1|B0|G|789
4V49|1|B0|A|790
*
4V49|1|B0|U|800
4V49|1|B0|A|801
4V49|1|B0|A|802
4V49|1|B0|C|803
4V49|1|B0|C|804
4V49|1|B0|G|805
4V49|1|B0|A|806
4V49|1|B0|A|807

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BA

50S ribosomal protein L2

Chain BC

50S ribosomal protein L4

Chain BQ

50S ribosomal protein L22