J3_4V4A_014

3D structure

PDB id

4V4A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the Wild Type Ribosome from E. Coli 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

9.5 Å

Loop

Sequence

UGAGCUA*UAGGA*UAACCGAA

Length

20 nucleotides

Bulged bases

4V4A|1|B0|G|699, 4V4A|1|B0|G|789, 4V4A|1|B0|A|802, 4V4A|1|B0|C|803, 4V4A|1|B0|G|805

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4A|1|B0|U|696
4V4A|1|B0|G|697
4V4A|1|B0|A|698
4V4A|1|B0|G|699
4V4A|1|B0|C|700
4V4A|1|B0|U|701
4V4A|1|B0|A|702
*
4V4A|1|B0|U|786
4V4A|1|B0|A|787
4V4A|1|B0|G|788
4V4A|1|B0|G|789
4V4A|1|B0|A|790
*
4V4A|1|B0|U|800
4V4A|1|B0|A|801
4V4A|1|B0|A|802
4V4A|1|B0|C|803
4V4A|1|B0|C|804
4V4A|1|B0|G|805
4V4A|1|B0|A|806
4V4A|1|B0|A|807

Current chains

Chain B0

23S RIBOSOMAL RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BA

50S ribosomal protein L2

Chain BC

50S ribosomal protein L4

Chain BQ

50S ribosomal protein L22