J3_4V4P_017

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

CUUGACAUG*CACAG*CUUACG

Length

20 nucleotides

Bulged bases

4V4P|1|BA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|BA|C|990
4V4P|1|BA|U|991
4V4P|1|BA|U|992
4V4P|1|BA|G|993
4V4P|1|BA|A|994
4V4P|1|BA|C|995
4V4P|1|BA|A|996
4V4P|1|BA|U|997
4V4P|1|BA|G|998
*
4V4P|1|BA|C|1043
4V4P|1|BA|A|1044
4V4P|1|BA|C|1045
4V4P|1|BA|A|1046
4V4P|1|BA|G|1047
*
4V4P|1|BA|C|1210
4V4P|1|BA|U|1211
4V4P|1|BA|U|1212
4V4P|1|BA|A|1213
4V4P|1|BA|C|1214
4V4P|1|BA|G|1215

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BF

30S ribosomal protein S3

Chain BQ

30S ribosomal protein S14