J3_4V4P_025

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

CAG*CGAACCGGUG*CUCGGAUG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|AA|C|698
4V4P|1|AA|A|699
4V4P|1|AA|G|700
*
4V4P|1|AA|C|732
4V4P|1|AA|G|733
4V4P|1|AA|A|734
4V4P|1|AA|A|735
4V4P|1|AA|C|736
4V4P|1|AA|C|737
4V4P|1|AA|G|738
4V4P|1|AA|G|739
4V4P|1|AA|U|740
4V4P|1|AA|G|741
*
4V4P|1|AA|C|756
4V4P|1|AA|U|757
4V4P|1|AA|C|758
4V4P|1|AA|G|759
4V4P|1|AA|G|760
4V4P|1|AA|A|761
4V4P|1|AA|U|762
4V4P|1|AA|G|763

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A7

50S ribosomal protein L34

Chain AD

50S ribosomal protein L2