J3_4V4P_030
3D structure
- PDB id
- 4V4P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of 70S ribosome with thrS operator and tRNAs.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5.5 Å
Loop
- Sequence
- CCAUAGCG*CAGCGCCGAUGGUAC*GGAGAGUAGGUCG
- Length
- 36 nucleotides
- Bulged bases
- 4V4P|1|AB|C|12, 4V4P|1|AB|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4P|1|AB|C|11
4V4P|1|AB|C|12
4V4P|1|AB|A|13
4V4P|1|AB|U|14
4V4P|1|AB|A|15
4V4P|1|AB|G|16
4V4P|1|AB|C|17
4V4P|1|AB|G|18
*
4V4P|1|AB|C|65
4V4P|1|AB|A|66
4V4P|1|AB|G|67
4V4P|1|AB|C|68
4V4P|1|AB|G|69
4V4P|1|AB|C|70
4V4P|1|AB|C|71
4V4P|1|AB|G|72
4V4P|1|AB|A|73
4V4P|1|AB|U|74
4V4P|1|AB|G|75
4V4P|1|AB|G|76
4V4P|1|AB|U|77
4V4P|1|AB|A|78
4V4P|1|AB|C|79
*
4V4P|1|AB|G|97
4V4P|1|AB|G|98
4V4P|1|AB|A|99
4V4P|1|AB|G|100
4V4P|1|AB|A|101
4V4P|1|AB|G|102
4V4P|1|AB|U|103
4V4P|1|AB|A|104
4V4P|1|AB|G|105
4V4P|1|AB|G|106
4V4P|1|AB|U|107
4V4P|1|AB|C|108
4V4P|1|AB|G|109
Current chains
- Chain AB
- 5S ribosomal RNA
Nearby chains
- Chain A3
- 50S ribosomal protein L27
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain AG
- 50S ribosomal protein L5
- Chain AP
- 50S ribosomal protein L16
- Chain AQ
- 50S ribosomal protein L18
- Chain AV
- 50S general stress protein CTC (L25)
Coloring options: