J3_4V4S_017

3D structure

PDB id

4V4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

6.76 Å

Loop

Sequence

GGA*UUUAAAGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

4V4S|1|BA|A|1086, 4V4S|1|BA|A|1088, 4V4S|1|BA|G|1089

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4S|1|BA|G|1055
4V4S|1|BA|G|1056
4V4S|1|BA|A|1057
*
4V4S|1|BA|U|1081
4V4S|1|BA|U|1082
4V4S|1|BA|U|1083
4V4S|1|BA|A|1084
4V4S|1|BA|A|1085
4V4S|1|BA|A|1086
4V4S|1|BA|G|1087
4V4S|1|BA|A|1088
4V4S|1|BA|G|1089
4V4S|1|BA|U|1090
4V4S|1|BA|G|1091
*
4V4S|1|BA|C|1100
4V4S|1|BA|U|1101
4V4S|1|BA|C|1102
4V4S|1|BA|A|1103
4V4S|1|BA|C|1104

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B9

50S ribosomal protein L36

Chain BK

50S ribosomal protein L11