J3_4V4W_008

3D structure

PDB id

4V4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GCAG*CGAACC*GGAUGAC

Length

17 nucleotides

Bulged bases

4V4W|1|B0|A|764

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4W|1|B0|G|697
4V4W|1|B0|C|698
4V4W|1|B0|A|699
4V4W|1|B0|G|700
*
4V4W|1|B0|C|732
4V4W|1|B0|G|733
4V4W|1|B0|A|734
4V4W|1|B0|A|735
4V4W|1|B0|C|736
4V4W|1|B0|C|737
*
4V4W|1|B0|G|759
4V4W|1|B0|G|760
4V4W|1|B0|A|761
4V4W|1|B0|U|762
4V4W|1|B0|G|763
4V4W|1|B0|A|764
4V4W|1|B0|C|765

Current chains

Chain B0

23S ribosomal RNA

Nearby chains