J3_4V5A_036

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CCGC*GGAC*GGAGG

Length

13 nucleotides

Bulged bases

4V5A|1|CA|A|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|CA|C|1115
4V5A|1|CA|C|1116
4V5A|1|CA|G|1117
4V5A|1|CA|C|1118
*
4V5A|1|CA|G|1155
4V5A|1|CA|G|1156
4V5A|1|CA|A|1157
4V5A|1|CA|C|1158
*
4V5A|1|CA|G|1181
4V5A|1|CA|G|1182
4V5A|1|CA|A|1183
4V5A|1|CA|G|1184
4V5A|1|CA|G|1185

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CB

30S RIBOSOMAL PROTEIN S2

Chain CG

30S RIBOSOMAL PROTEIN S7

Chain CI

30S RIBOSOMAL PROTEIN S9

Chain CJ

30S RIBOSOMAL PROTEIN S10

Chain CN

30S RIBOSOMAL PROTEIN S14