J3_4V5A_072

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUAG*CGAAGC*GCGUUAAG

Length

18 nucleotides

Bulged bases

4V5A|1|CA|U|871

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|CA|C|826
4V5A|1|CA|U|827
4V5A|1|CA|A|828
4V5A|1|CA|G|829
*
4V5A|1|CA|C|857
4V5A|1|CA|G|858
4V5A|1|CA|A|859
4V5A|1|CA|A|860
4V5A|1|CA|G|861
4V5A|1|CA|C|862
*
4V5A|1|CA|G|867
4V5A|1|CA|C|868
4V5A|1|CA|G|869
4V5A|1|CA|U|870
4V5A|1|CA|U|871
4V5A|1|CA|A|872
4V5A|1|CA|A|873
4V5A|1|CA|G|874

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CB

30S RIBOSOMAL PROTEIN S2

Chain CE

30S RIBOSOMAL PROTEIN S5

Chain CH

30S RIBOSOMAL PROTEIN S8