J3_4V5B_002
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- GGAC*GAUAAGC*GAUUUCC
- Length
- 18 nucleotides
- Bulged bases
- 4V5B|1|AB|A|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5B|1|AB|G|54
4V5B|1|AB|G|55
4V5B|1|AB|A|56
4V5B|1|AB|C|57
*
4V5B|1|AB|G|70
4V5B|1|AB|A|71
4V5B|1|AB|U|72
4V5B|1|AB|A|73
4V5B|1|AB|A|74
4V5B|1|AB|G|75
4V5B|1|AB|C|76
*
4V5B|1|AB|G|110
4V5B|1|AB|A|111
4V5B|1|AB|U|112
4V5B|1|AB|U|113
4V5B|1|AB|U|114
4V5B|1|AB|C|115
4V5B|1|AB|C|116
Current chains
- Chain AB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain A2
- 50S RIBOSOMAL PROTEIN L34
- Chain AT
- 50S RIBOSOMAL PROTEIN L23
- Chain AX
- 50S RIBOSOMAL PROTEIN L29
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