J3_4V5B_030
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- CAUC*GUAUG*CAUUUAAAG
- Length
- 18 nucleotides
- Bulged bases
- 4V5B|1|CB|A|2518
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5B|1|CB|C|2517
4V5B|1|CB|A|2518
4V5B|1|CB|U|2519
4V5B|1|CB|C|2520
*
4V5B|1|CB|G|2545
4V5B|1|CB|U|2546
4V5B|1|CB|A|2547
4V5B|1|CB|U|2548
4V5B|1|CB|G|2549
*
4V5B|1|CB|C|2559
4V5B|1|CB|A|2560
4V5B|1|CB|U|2561
4V5B|1|CB|U|2562
4V5B|1|CB|U|2563
4V5B|1|CB|A|2564
4V5B|1|CB|A|2565
4V5B|1|CB|A|2566
4V5B|1|CB|G|2567
Current chains
- Chain CB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain C4
- 50S RIBOSOMAL PROTEIN L36
- Chain CD
- 50S RIBOSOMAL PROTEIN L3
- Chain CK
- 50S RIBOSOMAL PROTEIN L14
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