J3_4V5B_054
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- CUUGGAGGU*GCUUCCGGAG*CGUUAAG
- Length
- 26 nucleotides
- Bulged bases
- 4V5B|1|BA|U|871
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5B|1|BA|C|826
4V5B|1|BA|U|827
4V5B|1|BA|U|828
4V5B|1|BA|G|829
4V5B|1|BA|G|830
4V5B|1|BA|A|831
4V5B|1|BA|G|832
4V5B|1|BA|G|833
4V5B|1|BA|U|834
*
4V5B|1|BA|G|852
4V5B|1|BA|C|853
4V5B|1|BA|U|854
4V5B|1|BA|U|855
4V5B|1|BA|C|856
4V5B|1|BA|C|857
4V5B|1|BA|G|858
4V5B|1|BA|G|859
4V5B|1|BA|A|860
4V5B|1|BA|G|861
*
4V5B|1|BA|C|868
4V5B|1|BA|G|869
4V5B|1|BA|U|870
4V5B|1|BA|U|871
4V5B|1|BA|A|872
4V5B|1|BA|A|873
4V5B|1|BA|G|874
Current chains
- Chain BA
- 16S RIBOSOMAL RNA
Nearby chains
- Chain BB
- 30S RIBOSOMAL PROTEIN S2
- Chain BH
- 30S RIBOSOMAL PROTEIN S8
- Chain BR
- 30S RIBOSOMAL PROTEIN S18
- Chain BU
- 30S RIBOSOMAL PROTEIN S21
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