J3_4V5B_108
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- UAUC*GAGAC*GGUG
- Length
- 13 nucleotides
- Bulged bases
- 4V5B|1|DA|U|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5B|1|DA|U|1116
4V5B|1|DA|A|1117
4V5B|1|DA|U|1118
4V5B|1|DA|C|1119
*
4V5B|1|DA|G|1154
4V5B|1|DA|A|1155
4V5B|1|DA|G|1156
4V5B|1|DA|A|1157
4V5B|1|DA|C|1158
*
4V5B|1|DA|G|1181
4V5B|1|DA|G|1182
4V5B|1|DA|U|1183
4V5B|1|DA|G|1184
Current chains
- Chain DA
- 16S RIBOSOMAL RNA
Nearby chains
- Chain DB
- 30S RIBOSOMAL PROTEIN S2
- Chain DG
- 30S RIBOSOMAL PROTEIN S7
- Chain DI
- 30S RIBOSOMAL PROTEIN S9
- Chain DJ
- 30S RIBOSOMAL PROTEIN S10
- Chain DN
- 30S RIBOSOMAL PROTEIN S14
Coloring options: