J3_4V5G_046
3D structure
- PDB id
- 4V5G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 4V5G|1|DA|A|2518, 4V5G|1|DA|U|2519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V5G_046 not in the Motif Atlas
- Homologous match to J3_9DFE_017
- Geometric discrepancy: 0.1513
- The information below is about J3_9DFE_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.5
- Basepair signature
- cWW-tWH-cHW-F-cWW-tSS-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
4V5G|1|DA|C|2517
4V5G|1|DA|A|2518
4V5G|1|DA|U|2519
4V5G|1|DA|C|2520
*
4V5G|1|DA|G|2545
4V5G|1|DA|U|2546
4V5G|1|DA|U|2547
*
4V5G|1|DA|A|2561
4V5G|1|DA|U|2562
4V5G|1|DA|U|2563
4V5G|1|DA|A|2564
4V5G|1|DA|A|2565
4V5G|1|DA|A|2566
4V5G|1|DA|G|2567
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain DO
- 50S RIBOSOMAL PROTEIN L14
Coloring options: