J3_4V5M_020

3D structure

PDB id

4V5M (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.8 Å

Loop

Sequence

CAAG*CGCAAACC*GGUG

Length

16 nucleotides

Bulged bases

4V5M|1|BA|A|1609

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5M|1|BA|C|1306
4V5M|1|BA|A|1307
4V5M|1|BA|A|1308
4V5M|1|BA|G|1309
*
4V5M|1|BA|C|1605
4V5M|1|BA|G|1606
4V5M|1|BA|C|1607
4V5M|1|BA|A|1608
4V5M|1|BA|A|1609
4V5M|1|BA|A|1610
4V5M|1|BA|C|1611
4V5M|1|BA|C|1612
*
4V5M|1|BA|G|1619
4V5M|1|BA|G|1620
4V5M|1|BA|U|1621
4V5M|1|BA|G|1622

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B7

50S RIBOSOMAL PROTEIN L34