J3_4V5O_031
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- UAGAUAUUAGACCAAUC*GAUUGAG*CAAA
- Length
- 28 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5O|1|BA|U|207
4V5O|1|BA|A|208
4V5O|1|BA|G|209
4V5O|1|BA|A|210
4V5O|1|BA|U|211
4V5O|1|BA|A|212
4V5O|1|BA|U|213
4V5O|1|BA|U|214
4V5O|1|BA|A|215
4V5O|1|BA|G|216
4V5O|1|BA|A|217
4V5O|1|BA|C|218
4V5O|1|BA|C|219
4V5O|1|BA|A|220
4V5O|1|BA|A|221
4V5O|1|BA|U|222
4V5O|1|BA|C|223
*
4V5O|1|BA|G|234
4V5O|1|BA|A|235
4V5O|1|BA|U|236
4V5O|1|BA|U|237
4V5O|1|BA|G|238
4V5O|1|BA|A|239
4V5O|1|BA|G|240
*
4V5O|1|BA|C|247
4V5O|1|BA|A|248
4V5O|1|BA|A|249
4V5O|1|BA|A|250
Current chains
- Chain BA
- 18S RRNA
Nearby chains
- Chain B2
- 40S RIBOSOMAL PROTEIN S8
- Chain BQ
- RIBOSOMAL PROTEIN S17 CONTAINING PROTEIN
- Chain BW
- 40S RIBOSOMAL PROTEIN S4
- Chain BY
- RPS6E
Coloring options: