J3_4V61_008

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

GAAUC*GGGUGC*GAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|AA|G|952
4V61|1|AA|A|953
4V61|1|AA|A|954
4V61|1|AA|U|955
4V61|1|AA|C|956
*
4V61|1|AA|G|971
4V61|1|AA|G|972
4V61|1|AA|G|973
4V61|1|AA|U|974
4V61|1|AA|G|975
4V61|1|AA|C|976
*
4V61|1|AA|G|983
4V61|1|AA|A|984
4V61|1|AA|A|985
4V61|1|AA|C|986

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AC

Ribosomal Protein S3

Chain AN

Ribosomal Protein S14