J3_4V61_013
3D structure
- PDB id
- 4V61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.4 Å
Loop
- Sequence
- GUGAUCUA*UAGGGG*CCACUCGAAC
- Length
- 24 nucleotides
- Bulged bases
- 4V61|1|BA|U|697, 4V61|1|BA|C|800, 4V61|1|BA|G|803
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V61|1|BA|G|693
4V61|1|BA|U|694
4V61|1|BA|G|695
4V61|1|BA|A|696
4V61|1|BA|U|697
4V61|1|BA|C|698
4V61|1|BA|U|699
4V61|1|BA|A|700
*
4V61|1|BA|U|784
4V61|1|BA|A|785
4V61|1|BA|G|786
4V61|1|BA|G|787
4V61|1|BA|G|788
4V61|1|BA|G|789
*
4V61|1|BA|C|797
4V61|1|BA|C|798
4V61|1|BA|A|799
4V61|1|BA|C|800
4V61|1|BA|U|801
4V61|1|BA|C|802
4V61|1|BA|G|803
4V61|1|BA|A|804
4V61|1|BA|A|805
4V61|1|BA|C|806
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain B4
- Ribosomal Protein L34
- Chain BE
- Ribosomal Protein L2
- Chain BG
- Ribosomal Protein L4
- Chain BU
- Ribosomal Protein L22
Coloring options: