J3_4V61_019
3D structure
- PDB id
- 4V61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.4 Å
Loop
- Sequence
- AUUGGCU*AUUCUAAC*GGACAUU
- Length
- 22 nucleotides
- Bulged bases
- 4V61|1|BA|C|2243
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V61|1|BA|A|2104
4V61|1|BA|U|2105
4V61|1|BA|U|2106
4V61|1|BA|G|2107
4V61|1|BA|G|2108
4V61|1|BA|C|2109
4V61|1|BA|U|2110
*
4V61|1|BA|A|2207
4V61|1|BA|U|2208
4V61|1|BA|U|2209
4V61|1|BA|C|2210
4V61|1|BA|U|2211
4V61|1|BA|A|2212
4V61|1|BA|A|2213
4V61|1|BA|C|2214
*
4V61|1|BA|G|2240
4V61|1|BA|G|2241
4V61|1|BA|A|2242
4V61|1|BA|C|2243
4V61|1|BA|A|2244
4V61|1|BA|U|2245
4V61|1|BA|U|2246
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain BE
- Ribosomal Protein L2
- Chain BJ
- Ribosomal Protein L9
- Chain BY
- Ribosomal Protein L28
Coloring options: