J3_4V61_025
3D structure
- PDB id
- 4V61 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.4 Å
Loop
- Sequence
- CUCGU*AGACUGC*GAGGAAGGUGAG
- Length
- 24 nucleotides
- Bulged bases
- 4V61|1|AA|U|1131
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V61|1|AA|C|1063
4V61|1|AA|U|1064
4V61|1|AA|C|1065
4V61|1|AA|G|1066
4V61|1|AA|U|1067
*
4V61|1|AA|A|1103
4V61|1|AA|G|1104
4V61|1|AA|A|1105
4V61|1|AA|C|1106
4V61|1|AA|U|1107
4V61|1|AA|G|1108
4V61|1|AA|C|1109
*
4V61|1|AA|G|1123
4V61|1|AA|A|1124
4V61|1|AA|G|1125
4V61|1|AA|G|1126
4V61|1|AA|A|1127
4V61|1|AA|A|1128
4V61|1|AA|G|1129
4V61|1|AA|G|1130
4V61|1|AA|U|1131
4V61|1|AA|G|1132
4V61|1|AA|A|1133
4V61|1|AA|G|1134
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AB
- Ribosomal Protein S2
- Chain AC
- Ribosomal Protein S3
- Chain AG
- Ribosomal Protein S7
- Chain AI
- Ribosomal Protein S9
- Chain AJ
- Ribosomal Protein S10
- Chain AN
- Ribosomal Protein S14
Coloring options: