J3_4V61_027

3D structure

PDB id

4V61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

9.4 Å

Loop

Sequence

CGAAUC*GAACCCUAGAUG*CAGUAG

Length

24 nucleotides

Bulged bases

4V61|1|BA|U|330

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V61|1|BA|C|307
4V61|1|BA|G|308
4V61|1|BA|A|309
4V61|1|BA|A|310
4V61|1|BA|U|311
4V61|1|BA|C|312
*
4V61|1|BA|G|324
4V61|1|BA|A|325
4V61|1|BA|A|326
4V61|1|BA|C|327
4V61|1|BA|C|328
4V61|1|BA|C|329
4V61|1|BA|U|330
4V61|1|BA|A|331
4V61|1|BA|G|332
4V61|1|BA|A|333
4V61|1|BA|U|334
4V61|1|BA|G|335
*
4V61|1|BA|C|345
4V61|1|BA|A|346
4V61|1|BA|G|347
4V61|1|BA|U|348
4V61|1|BA|A|349
4V61|1|BA|G|350

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BG

Ribosomal Protein L4

Chain BW

Ribosomal Protein L24