J3_4V63_052
3D structure
- PDB id
- 4V63 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural basis for translation termination on the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.21 Å
Loop
- Sequence
- CAUC*GUU*AUUAAAG
- Length
- 14 nucleotides
- Bulged bases
- 4V63|1|DA|A|2518, 4V63|1|DA|U|2519
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4V63_052 not in the Motif Atlas
- Homologous match to J3_9DFE_017
- Geometric discrepancy: 0.1175
- The information below is about J3_9DFE_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32601.6
- Basepair signature
- cWW-cWH-cWW-tWH-tSS-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
4V63|1|DA|C|2517
4V63|1|DA|A|2518
4V63|1|DA|U|2519
4V63|1|DA|C|2520
*
4V63|1|DA|G|2545
4V63|1|DA|U|2546
4V63|1|DA|U|2547
*
4V63|1|DA|A|2561
4V63|1|DA|U|2562
4V63|1|DA|U|2563
4V63|1|DA|A|2564
4V63|1|DA|A|2565
4V63|1|DA|A|2566
4V63|1|DA|G|2567
Current chains
- Chain DA
- 23S RRNA
Nearby chains
- Chain DO
- 50S ribosomal protein L14
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