J3_4V65_002

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CGGUU*AGCUUG*CG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|C|586
4V65|1|A1|G|587
4V65|1|A1|G|588
4V65|1|A1|U|589
4V65|1|A1|U|590
*
4V65|1|A1|A|649
4V65|1|A1|G|650
4V65|1|A1|C|651
4V65|1|A1|U|652
4V65|1|A1|U|653
4V65|1|A1|G|654
*
4V65|1|A1|C|754
4V65|1|A1|G|755

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AH

30S ribosomal protein S15

Chain AJ

30S ribosomal protein S17

Chain AV

30S ribosomal protein S8