J3_4V65_012
3D structure
- PDB id
- 4V65 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome in the Pre-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- UAGAAUU*GGAAUACCGGUGGC*GCGG
- Length
- 25 nucleotides
- Bulged bases
- 4V65|1|A1|C|719, 4V65|1|A1|C|720, 4V65|1|A1|U|723, 4V65|1|A1|C|732
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V65|1|A1|U|672
4V65|1|A1|A|673
4V65|1|A1|G|674
4V65|1|A1|A|675
4V65|1|A1|A|676
4V65|1|A1|U|677
4V65|1|A1|U|678
*
4V65|1|A1|G|713
4V65|1|A1|G|714
4V65|1|A1|A|715
4V65|1|A1|A|716
4V65|1|A1|U|717
4V65|1|A1|A|718
4V65|1|A1|C|719
4V65|1|A1|C|720
4V65|1|A1|G|721
4V65|1|A1|G|722
4V65|1|A1|U|723
4V65|1|A1|G|724
4V65|1|A1|G|725
4V65|1|A1|C|726
*
4V65|1|A1|G|731
4V65|1|A1|C|732
4V65|1|A1|G|733
4V65|1|A1|G|734
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain AC
- 30S ribosomal protein S11
- Chain AK
- 30S ribosomal protein S18
- Chain AQ
- 30S ribosomal protein S21
- Chain AT
- 30S ribosomal protein S6
- Chain BN
- 50S ribosomal protein L2
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