J3_4V65_015
3D structure
- PDB id
- 4V65 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome in the Pre-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- CUUGACAUCC*GAGACAGGUGCUGCAU*AUGGCCCUUACG
- Length
- 38 nucleotides
- Bulged bases
- 4V65|1|A1|U|1049, 4V65|1|A1|C|1054
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V65|1|A1|C|990
4V65|1|A1|U|991
4V65|1|A1|U|992
4V65|1|A1|G|993
4V65|1|A1|A|994
4V65|1|A1|C|995
4V65|1|A1|A|996
4V65|1|A1|U|997
4V65|1|A1|C|998
4V65|1|A1|C|999
*
4V65|1|A1|G|1041
4V65|1|A1|A|1042
4V65|1|A1|G|1043
4V65|1|A1|A|1044
4V65|1|A1|C|1045
4V65|1|A1|A|1046
4V65|1|A1|G|1047
4V65|1|A1|G|1048
4V65|1|A1|U|1049
4V65|1|A1|G|1050
4V65|1|A1|C|1051
4V65|1|A1|U|1052
4V65|1|A1|G|1053
4V65|1|A1|C|1054
4V65|1|A1|A|1055
4V65|1|A1|U|1056
*
4V65|1|A1|A|1204
4V65|1|A1|U|1205
4V65|1|A1|G|1206
4V65|1|A1|G|1207
4V65|1|A1|C|1208
4V65|1|A1|C|1209
4V65|1|A1|C|1210
4V65|1|A1|U|1211
4V65|1|A1|U|1212
4V65|1|A1|A|1213
4V65|1|A1|C|1214
4V65|1|A1|G|1215
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain AA
- Transfer RNA; tRNA
- Chain AG
- 30S ribosomal protein S14
- Chain AM
- mRNA model
- Chain AO
- 30S ribosomal protein S3
- Chain AX
- 30S ribosomal protein S10
Coloring options: