J3_4V65_016

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGAAGUU*AAUGUGC*GAACC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|A1|G|1002
4V65|1|A1|G|1003
4V65|1|A1|A|1004
4V65|1|A1|A|1005
4V65|1|A1|G|1006
4V65|1|A1|U|1007
4V65|1|A1|U|1008
*
4V65|1|A1|A|1021
4V65|1|A1|A|1022
4V65|1|A1|U|1023
4V65|1|A1|G|1024
4V65|1|A1|U|1025
4V65|1|A1|G|1026
4V65|1|A1|C|1027
*
4V65|1|A1|G|1034
4V65|1|A1|A|1035
4V65|1|A1|A|1036
4V65|1|A1|C|1037
4V65|1|A1|C|1038

Current chains

Chain A1

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S14