J3_4V65_020
3D structure
- PDB id
- 4V65 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E. coli ribosome in the Pre-accommodation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9 Å
Loop
- Sequence
- GCCGUAG*CGCCGAUGGUAGUG*UGCGAGAGUAGGGAAC
- Length
- 37 nucleotides
- Bulged bases
- 4V65|1|BA|C|12, 4V65|1|BA|G|13, 4V65|1|BA|U|14, 4V65|1|BA|C|97
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V65|1|BA|G|10
4V65|1|BA|C|11
4V65|1|BA|C|12
4V65|1|BA|G|13
4V65|1|BA|U|14
4V65|1|BA|A|15
4V65|1|BA|G|16
*
4V65|1|BA|C|68
4V65|1|BA|G|69
4V65|1|BA|C|70
4V65|1|BA|C|71
4V65|1|BA|G|72
4V65|1|BA|A|73
4V65|1|BA|U|74
4V65|1|BA|G|75
4V65|1|BA|G|76
4V65|1|BA|U|77
4V65|1|BA|A|78
4V65|1|BA|G|79
4V65|1|BA|U|80
4V65|1|BA|G|81
*
4V65|1|BA|U|95
4V65|1|BA|G|96
4V65|1|BA|C|97
4V65|1|BA|G|98
4V65|1|BA|A|99
4V65|1|BA|G|100
4V65|1|BA|A|101
4V65|1|BA|G|102
4V65|1|BA|U|103
4V65|1|BA|A|104
4V65|1|BA|G|105
4V65|1|BA|G|106
4V65|1|BA|G|107
4V65|1|BA|A|108
4V65|1|BA|A|109
4V65|1|BA|C|110
Current chains
- Chain BA
- 5S rRNA
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BC
- 50S ribosomal protein L25
- Chain BF
- 50S ribosomal protein L16
- Chain BH
- 50S ribosomal protein L18
- Chain BP
- 50S ribosomal protein L27
- Chain BR
- 50S ribosomal protein L30
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