J3_4V65_022

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GUGGAAG*CGCGAUACAG*CGUACAC

Length

24 nucleotides

Bulged bases

4V65|1|BB|G|317, 4V65|1|BB|U|321

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|G|295
4V65|1|BB|U|296
4V65|1|BB|G|297
4V65|1|BB|G|298
4V65|1|BB|A|299
4V65|1|BB|A|300
4V65|1|BB|G|301
*
4V65|1|BB|C|316
4V65|1|BB|G|317
4V65|1|BB|C|318
4V65|1|BB|G|319
4V65|1|BB|A|320
4V65|1|BB|U|321
4V65|1|BB|A|322
4V65|1|BB|C|323
4V65|1|BB|A|324
4V65|1|BB|G|325
*
4V65|1|BB|C|337
4V65|1|BB|G|338
4V65|1|BB|U|339
4V65|1|BB|A|340
4V65|1|BB|C|341
4V65|1|BB|A|342
4V65|1|BB|C|343

Current chains

Chain BB

23S rRNA

Nearby chains

Chain B1

50S ribosomal protein L4

Chain BO

50S ribosomal protein L24