J3_4V65_025

3D structure

PDB id

4V65 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome in the Pre-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GGGGACGG*CC*GAAAAGCC

Length

18 nucleotides

Bulged bases

4V65|1|BB|A|1569

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V65|1|BB|G|1423
4V65|1|BB|G|1424
4V65|1|BB|G|1425
4V65|1|BB|G|1426
4V65|1|BB|A|1427
4V65|1|BB|C|1428
4V65|1|BB|G|1429
4V65|1|BB|G|1430
*
4V65|1|BB|C|1564
4V65|1|BB|C|1565
*
4V65|1|BB|G|1568
4V65|1|BB|A|1569
4V65|1|BB|A|1570
4V65|1|BB|A|1571
4V65|1|BB|A|1572
4V65|1|BB|G|1573
4V65|1|BB|C|1574
4V65|1|BB|C|1575

Current chains

Chain BB

23S rRNA

Nearby chains

Chain BN

50S ribosomal protein L2