3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
GUA*UACCGGUGGC*GCGGC
Length
18 nucleotides
Bulged bases
4V66|1|A1|C|720, 4V66|1|A1|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|A1|G|671
4V66|1|A1|U|672
4V66|1|A1|A|673
*
4V66|1|A1|U|717
4V66|1|A1|A|718
4V66|1|A1|C|719
4V66|1|A1|C|720
4V66|1|A1|G|721
4V66|1|A1|G|722
4V66|1|A1|U|723
4V66|1|A1|G|724
4V66|1|A1|G|725
4V66|1|A1|C|726
*
4V66|1|A1|G|731
4V66|1|A1|C|732
4V66|1|A1|G|733
4V66|1|A1|G|734
4V66|1|A1|C|735

Current chains

Chain A1
16S rRNA

Nearby chains

Chain AC
30S ribosomal protein S11
Chain AK
30S ribosomal protein S18
Chain AQ
30S ribosomal protein S21
Chain AT
30S ribosomal protein S6

Coloring options:

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