3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
UUAUCC*GGAGAC*GGUGG
Length
17 nucleotides
Bulged bases
4V66|1|A1|U|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|A1|U|1115
4V66|1|A1|U|1116
4V66|1|A1|A|1117
4V66|1|A1|U|1118
4V66|1|A1|C|1119
4V66|1|A1|C|1120
*
4V66|1|A1|G|1153
4V66|1|A1|G|1154
4V66|1|A1|A|1155
4V66|1|A1|G|1156
4V66|1|A1|A|1157
4V66|1|A1|C|1158
*
4V66|1|A1|G|1181
4V66|1|A1|G|1182
4V66|1|A1|U|1183
4V66|1|A1|G|1184
4V66|1|A1|G|1185

Current chains

Chain A1
16S rRNA

Nearby chains

Chain AG
30S ribosomal protein S14
Chain AU
30S ribosomal protein S7
Chain AW
30S ribosomal protein S9
Chain AX
30S ribosomal protein S10

Coloring options:

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