J3_4V66_007

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GCCGUAG*CGCC*GGGAAC

Length

17 nucleotides

Bulged bases

4V66|1|BA|C|12, 4V66|1|BA|G|13, 4V66|1|BA|U|14

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BA|G|10
4V66|1|BA|C|11
4V66|1|BA|C|12
4V66|1|BA|G|13
4V66|1|BA|U|14
4V66|1|BA|A|15
4V66|1|BA|G|16
*
4V66|1|BA|C|68
4V66|1|BA|G|69
4V66|1|BA|C|70
4V66|1|BA|C|71
*
4V66|1|BA|G|105
4V66|1|BA|G|106
4V66|1|BA|G|107
4V66|1|BA|A|108
4V66|1|BA|A|109
4V66|1|BA|C|110

Current chains

Chain BA

5S rRNA

Nearby chains

Chain BB

Large subunit ribosomal RNA; LSU rRNA

Chain BC

50S ribosomal protein L25

Chain BH

50S ribosomal protein L18

Chain BP

50S ribosomal protein L27