J3_4V66_011

3D structure

PDB id

4V66 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli ribosome and the tRNAs in Post-accommodation state

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

CUGAACAU*AUGUUCUAAC*GGACAG

Length

24 nucleotides

Bulged bases

4V66|1|BB|A|2198

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V66|1|BB|C|2091
4V66|1|BB|U|2092
4V66|1|BB|G|2093
4V66|1|BB|A|2094
4V66|1|BB|A|2095
4V66|1|BB|C|2096
4V66|1|BB|A|2097
4V66|1|BB|U|2098
*
4V66|1|BB|A|2191
4V66|1|BB|U|2192
4V66|1|BB|G|2193
4V66|1|BB|U|2194
4V66|1|BB|U|2195
4V66|1|BB|C|2196
4V66|1|BB|U|2197
4V66|1|BB|A|2198
4V66|1|BB|A|2199
4V66|1|BB|C|2200
*
4V66|1|BB|G|2223
4V66|1|BB|G|2224
4V66|1|BB|A|2225
4V66|1|BB|C|2226
4V66|1|BB|A|2227
4V66|1|BB|G|2228

Current chains

Chain BB

23S rRNA

Nearby chains

Chain A1

Small subunit ribosomal RNA; SSU rRNA

Chain B4

50S ribosomal protein L9

Chain BN

50S ribosomal protein L2

Chain BS

50S ribosomal protein L31