3D structure

PDB id
4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
UAUCC*GGAGACUGC*GAGGAAGGUG
Length
24 nucleotides
Bulged bases
4V66|1|A1|U|1183
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V66|1|A1|U|1116
4V66|1|A1|A|1117
4V66|1|A1|U|1118
4V66|1|A1|C|1119
4V66|1|A1|C|1120
*
4V66|1|A1|G|1153
4V66|1|A1|G|1154
4V66|1|A1|A|1155
4V66|1|A1|G|1156
4V66|1|A1|A|1157
4V66|1|A1|C|1158
4V66|1|A1|U|1159
4V66|1|A1|G|1160
4V66|1|A1|C|1161
*
4V66|1|A1|G|1175
4V66|1|A1|A|1176
4V66|1|A1|G|1177
4V66|1|A1|G|1178
4V66|1|A1|A|1179
4V66|1|A1|A|1180
4V66|1|A1|G|1181
4V66|1|A1|G|1182
4V66|1|A1|U|1183
4V66|1|A1|G|1184

Current chains

Chain A1
16S rRNA

Nearby chains

Chain AU
30S ribosomal protein S7
Chain AW
30S ribosomal protein S9
Chain AX
30S ribosomal protein S10

Coloring options:

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