Loop J3_4V66

3D structure

PDB id: 4V66 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of the E. coli ribosome and the tRNAs in Post-accommodation state
Experimental method: ELECTRON MICROSCOPY
Resolution: 9 Å

Loop

Sequence: CCCGGUGAUCUAGCCAUGG*UGUGGCUGGGGG*CAAUCAAACCGGG
Length: 44 nucleotides
Bulged bases: 4V66|1|BB|U|686, 4V66|1|BB|U|769, 4V66|1|BB|A|788, 4V66|1|BB|A|789, 4V66|1|BB|U|790, 4V66|1|BB|A|792
QA status: Unknown status

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4V66|1|BB|C|678
4V66|1|BB|C|679
4V66|1|BB|C|680
4V66|1|BB|G|681
4V66|1|BB|G|682
4V66|1|BB|U|683
4V66|1|BB|G|684
4V66|1|BB|A|685
4V66|1|BB|U|686
4V66|1|BB|C|687
4V66|1|BB|U|688
4V66|1|BB|A|689
4V66|1|BB|G|690
4V66|1|BB|C|691
4V66|1|BB|C|692
4V66|1|BB|A|693
4V66|1|BB|U|694
4V66|1|BB|G|695
4V66|1|BB|G|696
*
4V66|1|BB|U|767
4V66|1|BB|G|768
4V66|1|BB|U|769
4V66|1|BB|G|770
4V66|1|BB|G|771
4V66|1|BB|C|772
4V66|1|BB|U|773
4V66|1|BB|G|774
4V66|1|BB|G|775
4V66|1|BB|G|776
4V66|1|BB|G|777
4V66|1|BB|G|778
*
4V66|1|BB|C|787
4V66|1|BB|A|788
4V66|1|BB|A|789
4V66|1|BB|U|790
4V66|1|BB|C|791
4V66|1|BB|A|792
4V66|1|BB|A|793
4V66|1|BB|A|794
4V66|1|BB|C|795
4V66|1|BB|C|796
4V66|1|BB|G|797
4V66|1|BB|G|798
4V66|1|BB|G|799

Current chains

Chain BB: 23S rRNA

Nearby chains

Chain B1: 50S ribosomal protein L4
Chain BL: 50S ribosomal protein L22
Chain BN: 50S ribosomal protein L2
Chain BV: 50S ribosomal protein L34

J3_4V66_021